PH01000280G0370's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G17670 : 2.00E-95
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01000280
Strand: -
| Region | Start | End |
| gene | 230212 | 234682 |
| mRNA | 230212 | 234682 |
| exon | 230212 | 231116 |
| exon | 231211 | 231382 |
| exon | 231823 | 231945 |
| exon | 232568 | 232682 |
| exon | 232966 | 233021 |
| exon | 233129 | 233295 |
| exon | 233746 | 234682 |
| CDS | 230931 | 231116 |
| CDS | 231211 | 231382 |
| CDS | 231823 | 231945 |
| CDS | 232568 | 232682 |
| CDS | 232966 | 233021 |
| CDS | 233129 | 233295 |
| CDS | 233746 | 233781 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07819.12 | PGAP1 | 85 | 129 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006505 | GPI anchor metabolic process |
| GO:0006886 | intracellular protein transport |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.