PH01000281G0780's details annotation
1.Annotation
ICBR annotation: leucine-rich repeat protein-related, putative, expressed
Blast result AT1G25570 : 2.00E-160
Blast annotation: Di-glucose binding protein with Leucine-rich repeat domain
2.Location
Scaffold: PH01000281
Strand: +
| Region | Start | End |
| gene | 440800 | 448148 |
| mRNA | 440800 | 448148 |
| exon | 440800 | 441494 |
| exon | 441553 | 442644 |
| exon | 442742 | 442886 |
| exon | 443889 | 443952 |
| exon | 445644 | 445712 |
| exon | 445748 | 445860 |
| exon | 446381 | 446589 |
| exon | 446897 | 448148 |
| CDS | 441413 | 441494 |
| CDS | 441553 | 442644 |
| CDS | 442742 | 442886 |
| CDS | 443889 | 443952 |
| CDS | 445644 | 445712 |
| CDS | 445748 | 445860 |
| CDS | 446381 | 446589 |
| CDS | 446897 | 447012 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12819.6 | Malectin_like | 54 | 379 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.