PH01000286G0650's details annotation
1.Annotation
ICBR annotation: multidrug resistance-associated protein 11, putative, expressed
Blast result AT2G07680 : 0.00E+00
Blast annotation: multidrug resistance-associated protein 11
2.Location
Scaffold: PH01000286
Strand: -
| Region | Start | End |
| gene | 437007 | 446615 |
| mRNA | 437007 | 446615 |
| exon | 437007 | 437155 |
| exon | 437398 | 437565 |
| exon | 437730 | 437919 |
| exon | 438051 | 438238 |
| exon | 438310 | 438471 |
| exon | 438542 | 438652 |
| exon | 438749 | 438883 |
| exon | 438955 | 439008 |
| exon | 440217 | 440270 |
| exon | 440374 | 440485 |
| exon | 440560 | 440735 |
| exon | 441315 | 441462 |
| exon | 441561 | 441847 |
| exon | 442003 | 442150 |
| exon | 442230 | 442361 |
| exon | 442514 | 442581 |
| exon | 442665 | 442766 |
| exon | 443190 | 443444 |
| exon | 443529 | 443609 |
| exon | 443895 | 444012 |
| exon | 444724 | 444783 |
| exon | 444895 | 445013 |
| exon | 445570 | 445657 |
| exon | 446089 | 446615 |
| CDS | 437075 | 437155 |
| CDS | 437398 | 437565 |
| CDS | 437730 | 437919 |
| CDS | 438051 | 438238 |
| CDS | 438310 | 438471 |
| CDS | 438542 | 438652 |
| CDS | 438749 | 438883 |
| CDS | 438955 | 439008 |
| CDS | 440217 | 440270 |
| CDS | 440374 | 440485 |
| CDS | 440560 | 440735 |
| CDS | 441315 | 441462 |
| CDS | 441561 | 441847 |
| CDS | 442003 | 442150 |
| CDS | 442230 | 442361 |
| CDS | 442514 | 442581 |
| CDS | 442665 | 442766 |
| CDS | 443190 | 443444 |
| CDS | 443529 | 443609 |
| CDS | 443895 | 444012 |
| CDS | 444724 | 444783 |
| CDS | 444895 | 445013 |
| CDS | 445570 | 445657 |
| CDS | 446089 | 446153 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00005.26 | ABC_tran | 244 | 376 |
| PF00664.22 | ABC_membrane | 521 | 672 |
| PF00005.26 | ABC_tran | 813 | 960 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
| GO:0006810 | transport |
| GO:0016021 | integral to membrane |
| GO:0016887 | ATPase activity |
| GO:0017111 | nucleoside-triphosphatase activity |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances |
| GO:0055085 | transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.