PH01000288G0350's details annotation
1.Annotation
ICBR annotation: tesmin/TSO1-like CXC domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000288
Strand: -
| Region | Start | End |
| gene | 230495 | 239055 |
| mRNA | 230495 | 239055 |
| exon | 230495 | 231123 |
| exon | 231206 | 231365 |
| exon | 231984 | 232005 |
| exon | 232062 | 232128 |
| exon | 232230 | 232325 |
| exon | 232731 | 232805 |
| exon | 232910 | 233349 |
| exon | 233525 | 234248 |
| exon | 237051 | 239055 |
| CDS | 230742 | 231123 |
| CDS | 231206 | 231365 |
| CDS | 231984 | 232005 |
| CDS | 232062 | 232128 |
| CDS | 232230 | 232325 |
| CDS | 232731 | 232805 |
| CDS | 232910 | 233349 |
| CDS | 233525 | 234248 |
| CDS | 237051 | 237172 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.