PH01000294G0480's details annotation
1.Annotation
ICBR annotation: OB-fold nucleic acid binding domain containing protein, putative, expressed
Blast result AT1G07130 : 4.60E-29
Blast annotation: Nucleic acid-binding, OB-fold-like protein
2.Location
Scaffold: PH01000294
Strand: +
| Region | Start | End |
| gene | 345644 | 347516 |
| mRNA | 345644 | 347516 |
| exon | 345644 | 345870 |
| exon | 346264 | 347516 |
| CDS | 345817 | 345870 |
| CDS | 346264 | 346761 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01336.24 | tRNA_anti-codon | 64 | 152 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003676 | nucleic acid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.