PH01000299G0560's details annotation
1.Annotation
ICBR annotation: multiple myeloma tumor-associated protein 2, putative, expressed
Blast result AT3G52220 : 4.90E-61
Blast annotation: -
2.Location
Scaffold: PH01000299
Strand: -
| Region | Start | End |
| gene | 367427 | 371880 |
| mRNA | 367427 | 371880 |
| exon | 367427 | 367977 |
| exon | 368143 | 368404 |
| exon | 369352 | 369441 |
| exon | 370869 | 371880 |
| CDS | 367680 | 367977 |
| CDS | 368143 | 368404 |
| CDS | 369352 | 369441 |
| CDS | 370869 | 370911 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000535 | GT37 GlycosylTransferases CMGC_MAPK (from iTAK) |
| coexpression network | CFinderM001403 | CMGC_DYRK-PRP4 (from iTAK) integral to membrane, |
| coexpression network | CFinderM001404 | integral to membrane, CMGC_DYRK-PRP4 (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10159.8 | MMtag | 8 | 83 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.