PH01000302G0780's details annotation
1.Annotation
ICBR annotation: xaa-Pro aminopeptidase, putative, expressed
Blast result AT1G09300 : 1.50E-48
Blast annotation: Metallopeptidase M24 family protein
2.Location
Scaffold: PH01000302
Strand: +
| Region | Start | End |
| gene | 499758 | 504055 |
| mRNA | 499758 | 504055 |
| exon | 499758 | 500001 |
| exon | 501327 | 501402 |
| exon | 501443 | 501591 |
| exon | 501987 | 502193 |
| exon | 503148 | 504055 |
| CDS | 499909 | 500001 |
| CDS | 501327 | 501402 |
| CDS | 501443 | 501591 |
| CDS | 501987 | 502193 |
| CDS | 503148 | 503255 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05195.15 | AMP_N | 56 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004177 | aminopeptidase activity |
| GO:0009987 | cellular process |
| GO:0030145 | manganese ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.