PH01000311G0660's details annotation
1.Annotation
ICBR annotation: 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed
Blast result AT1G05010 : 1.00E-115
Blast annotation: ethylene-forming enzyme
2.Location
Scaffold: PH01000311
Strand: -
| Region | Start | End |
| gene | 368675 | 371365 |
| mRNA | 368675 | 371365 |
| exon | 368675 | 370099 |
| exon | 370674 | 370903 |
| exon | 371177 | 371365 |
| CDS | 369466 | 370099 |
| CDS | 370674 | 370903 |
| CDS | 371177 | 371296 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14226.5 | DIOX_N | 10 | 71 |
| PF03171.19 | 2OG-FeII_Oxy | 168 | 259 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Cysteine and methionine metabolism | aminocyclopropanecarboxylate oxidase [EC:1.14.17.4] | ko00270 | K05933 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0016706 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.