PH01000312G0260's details annotation
1.Annotation
ICBR annotation: glutathione reductase, putative, expressed
Blast result AT3G54660 : 0.00E+00
Blast annotation: glutathione reductase
2.Location
Scaffold: PH01000312
Strand: +
| Region | Start | End |
| gene | 184623 | 190047 |
| mRNA | 184623 | 190047 |
| exon | 184623 | 185273 |
| exon | 186697 | 186922 |
| exon | 187028 | 187306 |
| exon | 187391 | 187567 |
| exon | 187822 | 187970 |
| exon | 188580 | 188643 |
| exon | 188715 | 188810 |
| exon | 188969 | 190047 |
| CDS | 184909 | 185273 |
| CDS | 186697 | 186922 |
| CDS | 187028 | 187306 |
| CDS | 187391 | 187567 |
| CDS | 187822 | 187970 |
| CDS | 188580 | 188643 |
| CDS | 188715 | 188810 |
| CDS | 188969 | 189163 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07992.13 | Pyr_redox_2 | 76 | 381 |
| PF02852.21 | Pyr_redox_dim | 401 | 451 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glutathione metabolism | glutathione reductase (NADPH) [EC:1.8.1.7] | ko00480 | K00383 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005737 | cytoplasm |
| GO:0016491 | oxidoreductase activity |
| GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
| GO:0045454 | cell redox homeostasis |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.