PH01000316G0170's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G23980 : 1.30E-91
Blast annotation: BLISTER
2.Location
Scaffold: PH01000316
Strand: -
| Region | Start | End |
| gene | 69410 | 78045 |
| mRNA | 69410 | 78045 |
| exon | 69410 | 69687 |
| exon | 69939 | 70094 |
| exon | 70344 | 70412 |
| exon | 70557 | 70738 |
| exon | 70822 | 70935 |
| exon | 71251 | 71318 |
| exon | 71674 | 71750 |
| exon | 72396 | 72506 |
| exon | 73082 | 73147 |
| exon | 74380 | 74445 |
| exon | 75109 | 75270 |
| exon | 75932 | 76467 |
| exon | 76566 | 77226 |
| exon | 77575 | 78045 |
| CDS | 69610 | 69687 |
| CDS | 69939 | 70094 |
| CDS | 70344 | 70412 |
| CDS | 70557 | 70738 |
| CDS | 70822 | 70935 |
| CDS | 71251 | 71318 |
| CDS | 71674 | 71750 |
| CDS | 72396 | 72506 |
| CDS | 73082 | 73147 |
| CDS | 74380 | 74445 |
| CDS | 75109 | 75270 |
| CDS | 75932 | 76467 |
| CDS | 76566 | 77226 |
| CDS | 77575 | 77658 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.