PH01000316G1010's details annotation
1.Annotation
ICBR annotation: importin subunit alpha, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000316
Strand: -
| Region | Start | End |
| gene | 641519 | 648289 |
| mRNA | 641519 | 648289 |
| exon | 641519 | 641709 |
| exon | 641907 | 641981 |
| exon | 642657 | 642754 |
| exon | 642956 | 643016 |
| exon | 643337 | 643402 |
| exon | 644153 | 644206 |
| exon | 644287 | 644375 |
| exon | 644836 | 644944 |
| exon | 646526 | 648289 |
| CDS | 641701 | 641709 |
| CDS | 641907 | 641981 |
| CDS | 642657 | 642754 |
| CDS | 642956 | 643016 |
| CDS | 643337 | 643402 |
| CDS | 644153 | 644206 |
| CDS | 644287 | 644375 |
| CDS | 644836 | 644944 |
| CDS | 646526 | 646822 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00514.22 | Arm | 100 | 134 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.