PH01000317G0210's details annotation
1.Annotation
ICBR annotation: NADH dehydrogenase I subunit N, putative, expressed
Blast result AT5G58260 : 8.20E-75
Blast annotation: oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor
2.Location
Scaffold: PH01000317
Strand: +
| Region | Start | End |
| gene | 133107 | 135253 |
| mRNA | 133107 | 135253 |
| exon | 133107 | 134658 |
| exon | 134765 | 134881 |
| exon | 134989 | 135074 |
| exon | 135178 | 135253 |
| CDS | 134311 | 134658 |
| CDS | 134765 | 134881 |
| CDS | 134989 | 135074 |
| CDS | 135178 | 135247 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11909.7 | NdhN | 57 | 194 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.