PH01000318G0600's details annotation
1.Annotation
ICBR annotation: receptor protein kinase, putative, expressed
Blast result AT4G34215 : 2.10E-76
Blast annotation: Domain of unknown function (DUF303)
2.Location
Scaffold: PH01000318
Strand: +
| Region | Start | End |
| gene | 484251 | 487589 |
| mRNA | 484251 | 487589 |
| exon | 484251 | 484970 |
| exon | 487345 | 487589 |
| CDS | 484662 | 484970 |
| CDS | 487345 | 487551 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000902 | CE6 Carbohydrate_Esterases GT1 GlycosylTransferases defense response, negative_regulation_of_transcription,_DNA-templated |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate_Esterases | CE6 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03629.17 | SASA | 2 | 231 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.