PH01000321G0080's details annotation
1.Annotation
ICBR annotation: impaired sucrose induction 1, putative
Blast result AT4G27750 : 4.80E-24
Blast annotation: binding
2.Location
Scaffold: PH01000321
Strand: +
| Region | Start | End |
| gene | 57162 | 61671 |
| mRNA | 57162 | 61671 |
| exon | 57162 | 57611 |
| exon | 57718 | 57923 |
| exon | 58574 | 58960 |
| exon | 60746 | 60844 |
| exon | 60953 | 61026 |
| exon | 61127 | 61671 |
| CDS | 57437 | 57611 |
| CDS | 57718 | 57923 |
| CDS | 58574 | 58960 |
| CDS | 60746 | 60844 |
| CDS | 60953 | 61026 |
| CDS | 61127 | 61355 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08045.10 | CDC14 | 270 | 325 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.