PH01000324G0970's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT1G15490 : 7.00E-180
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01000324
Strand: -
| Region | Start | End |
| gene | 645797 | 651347 |
| mRNA | 645797 | 651347 |
| exon | 645797 | 645909 |
| exon | 646276 | 646368 |
| exon | 646547 | 646747 |
| exon | 647063 | 647266 |
| exon | 647394 | 647522 |
| exon | 647998 | 648711 |
| exon | 648827 | 649134 |
| exon | 649659 | 651347 |
| CDS | 645811 | 645909 |
| CDS | 646276 | 646368 |
| CDS | 646547 | 646747 |
| CDS | 647063 | 647266 |
| CDS | 647394 | 647522 |
| CDS | 647998 | 648711 |
| CDS | 648827 | 649134 |
| CDS | 649659 | 649926 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 369 | 628 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.