PH01000325G0630's details annotation
1.Annotation
ICBR annotation: plastocyanin-like domain containing protein, putative, expressed
Blast result AT5G26330 : 4.10E-32
Blast annotation: Cupredoxin superfamily protein
2.Location
Scaffold: PH01000325
Strand: -
| Region | Start | End |
| gene | 413381 | 414611 |
| mRNA | 413381 | 414611 |
| exon | 413381 | 414611 |
| CDS | 413901 | 414269 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001317 | Ether_lipid_metabolism Endocytosis Glycerophospholipid_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02298.16 | Cu_bind_like | 38 | 121 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005507 | copper ion binding |
| GO:0009055 | electron carrier activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.