PH01000328G0140's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G70750 : 1.90E-68
Blast annotation: Protein of unknown function, DUF593
2.Location
Scaffold: PH01000328
Strand: -
| Region | Start | End |
| gene | 72713 | 77232 |
| mRNA | 72713 | 77232 |
| exon | 72713 | 74422 |
| exon | 74538 | 75137 |
| exon | 75626 | 77232 |
| CDS | 73062 | 74422 |
| CDS | 74538 | 75137 |
| CDS | 75626 | 76610 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001259 | phospholipid transport, Spliceosome |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04576.14 | Zein-binding | 621 | 711 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.