PH01000331G0130's details annotation
1.Annotation
ICBR annotation: ERD4 protein, putative, expressed
Blast result AT1G30360 : 0.00E+00
Blast annotation: Early-responsive to dehydration stress protein (ERD4)
2.Location
Scaffold: PH01000331
Strand: +
| Region | Start | End |
| gene | 122631 | 130043 |
| mRNA | 122631 | 130043 |
| exon | 122631 | 123360 |
| exon | 124204 | 124298 |
| exon | 125144 | 125419 |
| exon | 125543 | 126387 |
| exon | 126501 | 126756 |
| exon | 128963 | 128998 |
| exon | 129638 | 130043 |
| CDS | 123087 | 123360 |
| CDS | 124204 | 124298 |
| CDS | 125144 | 125419 |
| CDS | 125543 | 126387 |
| CDS | 126501 | 126756 |
| CDS | 128963 | 128998 |
| CDS | 129638 | 130018 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13967.5 | RSN1_TM | 5 | 149 |
| PF14703.5 | PHM7_cyt | 174 | 338 |
| PF02714.14 | RSN1_7TM | 349 | 631 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.