PH01000331G1100's details annotation 1.Annotation ICBR annotation: no apical meristem protein, putative
Blast result AT2G43000 : 4.30E-67 Blast annotation: NAC domain containing protein 42 2.Location Scaffold: PH01000331 Strand: - Region | Start | End | gene | 738170 | 740201 | mRNA | 738170 | 740201 | exon | 738170 | 738422 | exon | 738489 | 738858 | exon | 739037 | 739335 | exon | 739862 | 740201 | CDS | 738346 | 738422 | CDS | 738489 | 738858 | CDS | 739037 | 739335 | CDS | 739862 | 740069 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000016 | protein phosphorylation, protein kinase activity, transferase activity, transferring phosphorus-containing groups, protein serine/threonine kinase activity, ATP binding, RLK-Pelle_LRR-XII-1 (from iTAK) RLK-Pelle_DLSV (from iTAK) RLK-Pelle_WAK (from iTAK) ADP_binding polysaccharide_binding transmembrane_transporter_activity WRKY Transcription_Regulator(from PlantTFDB) recognition of pollen, transmembrane transport, defense response, RLK-Pelle_L-LEC (from iTAK) membrane, integral to membrane, RLK-Pelle_SD-2b (from iTAK) RLK-Pelle_WAK_LRK10L-1 (from iTAK) ATPase activity, substrate-specific transmembrane transporter activity, RLK-Pelle_LRR-XI-1 (from iTAK) 6-phosphofructokinase complex,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | NAC | Transcription_Regulator(from PlantTFDB) | NAC |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF02365.14 | NAM | 25 | 151 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003677 | DNA binding | GO:0006355 | regulation of transcription, DNA-dependent |
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