PH01000336G0240's details annotation
1.Annotation
ICBR annotation: OsFBT9 - F-box and tubby domain containing protein, expressed
Blast result AT1G53320 : 8.00E-83
Blast annotation: tubby like protein 7
2.Location
Scaffold: PH01000336
Strand: -
| Region | Start | End |
| gene | 177417 | 183512 |
| mRNA | 177417 | 183512 |
| exon | 177417 | 178890 |
| exon | 179647 | 179776 |
| exon | 180319 | 180403 |
| exon | 182021 | 183512 |
| CDS | 178332 | 178890 |
| CDS | 179647 | 179776 |
| CDS | 180319 | 180403 |
| CDS | 182021 | 182059 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | TUB |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01167.17 | Tub | 13 | 265 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.