PH01000336G1090's details annotation
1.Annotation
ICBR annotation: AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed
Blast result AT4G23440 : 0.00E+00
Blast annotation: Disease resistance protein (TIR-NBS class)
2.Location
Scaffold: PH01000336
Strand: +
| Region | Start | End |
| gene | 710514 | 714833 |
| mRNA | 710514 | 714833 |
| exon | 710514 | 714833 |
| CDS | 711746 | 714751 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01582.19 | TIR | 171 | 262 |
| PF00931.21 | NB-ARC | 472 | 632 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000166 | nucleotide binding |
| GO:0005515 | protein binding |
| GO:0007165 | signal transduction |
| GO:0017111 | nucleoside-triphosphatase activity |
| GO:0043531 | ADP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.