Gene details

Annotation of co-expression genes

PH01000343G0230's details annotation

1.Annotation

ICBR annotation: transcription initiation factor, putative, expressed

Blast result AT5G43130 : 1.20E-52
Blast annotation: TBP-associated factor 4

2.Location

Scaffold: PH01000343
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000809	glucose-6-phosphate isomerase activity, transcription factor TFIID complex, gluconeogenesis, transcription initiation, DNA-dependent, glycolysis, Nucleotide_excision_repair Ubiquitin_mediated_proteolysis
coexpression network	CFinderM001640	TLK (from iTAK) transcription factor TFIID complex, SNF2 Transcription_Regulator(from iTAK) transcription initiation, DNA-dependent, Nucleotide_excision_repair Ubiquitin_mediated_proteolysis

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005669	transcription factor TFIID complex
GO:0006352	DNA-dependent transcription, initiation

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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