PH01000353G0260's details annotation
1.Annotation
ICBR annotation: cyclin-J18-like, putative
Blast result AT2G01905 : 4.90E-52
Blast annotation: cyclin J18
2.Location
Scaffold: PH01000353
Strand: -
| Region | Start | End |
| gene | 193130 | 201445 |
| mRNA | 193130 | 201445 |
| exon | 193130 | 193864 |
| exon | 194169 | 194229 |
| exon | 194332 | 194458 |
| exon | 195070 | 195140 |
| exon | 195239 | 195277 |
| exon | 195334 | 195432 |
| exon | 196385 | 201445 |
| CDS | 193746 | 193864 |
| CDS | 194169 | 194229 |
| CDS | 194332 | 194458 |
| CDS | 195070 | 195140 |
| CDS | 195239 | 195277 |
| CDS | 195334 | 195432 |
| CDS | 196385 | 196498 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.