PH01000363G0950's details annotation
1.Annotation
ICBR annotation: homeodomain-like, putative, expressed
Blast result AT2G47820 : 6.40E-77
Blast annotation: -
2.Location
Scaffold: PH01000363
Strand: -
| Region | Start | End |
| gene | 639571 | 646137 |
| mRNA | 639571 | 646137 |
| exon | 639571 | 640947 |
| exon | 641011 | 641881 |
| exon | 642334 | 642400 |
| exon | 642488 | 643188 |
| exon | 643282 | 643320 |
| exon | 643473 | 643557 |
| exon | 645101 | 646137 |
| CDS | 639893 | 640947 |
| CDS | 641011 | 641881 |
| CDS | 642334 | 642400 |
| CDS | 642488 | 643188 |
| CDS | 643282 | 643320 |
| CDS | 643473 | 643557 |
| CDS | 645101 | 645195 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003677 | DNA binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.