PH01000366G0010's details annotation
1.Annotation
ICBR annotation: CSLA9 - cellulose synthase-like family A, expressed
Blast result AT5G03760 : 0.00E+00
Blast annotation: Nucleotide-diphospho-sugar transferases superfamily protein
2.Location
Scaffold: PH01000366
Strand: +
| Region | Start | End |
| gene | 1661 | 9418 |
| mRNA | 1661 | 9418 |
| exon | 1661 | 2456 |
| exon | 2614 | 2712 |
| exon | 4195 | 4447 |
| exon | 7182 | 7292 |
| exon | 7846 | 7982 |
| exon | 8141 | 8254 |
| exon | 8333 | 8532 |
| exon | 8634 | 8828 |
| exon | 8900 | 9418 |
| CDS | 2133 | 2456 |
| CDS | 2614 | 2712 |
| CDS | 4195 | 4447 |
| CDS | 7182 | 7292 |
| CDS | 7846 | 7982 |
| CDS | 8141 | 8254 |
| CDS | 8333 | 8532 |
| CDS | 8634 | 8828 |
| CDS | 8900 | 9062 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT2 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13641.5 | Glyco_tranf_2_3 | 96 | 330 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.