PH01000370G0110's details annotation
1.Annotation
ICBR annotation: receptor-like protein kinase At3g46290 precursor, putative, expressed
Blast result AT4G00300 : 6.70E-78
Blast annotation: fringe-related protein
2.Location
Scaffold: PH01000370
Strand: +
| Region | Start | End |
| gene | 48085 | 50056 |
| mRNA | 48085 | 50056 |
| exon | 48085 | 50056 |
| CDS | 48298 | 49683 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000942 | (1->3)-beta-D-glucan biosynthetic process, negative_regulation_of_transcription,_DNA-templated GT31 GlycosylTransferases SNF2 Transcription_Regulator(from iTAK) 1,3-beta-D-glucan synthase complex, |
| coexpression network | CFinderM001643 | protein targeting, protein import, GT31 GlycosylTransferases Protein_export |
| coexpression network | CFinderM001807 | GT31 GlycosylTransferases SNF2 Transcription_Regulator(from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT31 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12819.6 | Malectin_like | 36 | 382 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.