PH01000371G0140's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G28130 : 2.90E-11
Blast annotation: -
2.Location
Scaffold: PH01000371
Strand: -
| Region | Start | End |
| gene | 106879 | 113123 |
| mRNA | 106879 | 113123 |
| exon | 106879 | 107376 |
| exon | 107745 | 107817 |
| exon | 108002 | 108131 |
| exon | 108216 | 108343 |
| exon | 108710 | 108812 |
| exon | 110697 | 111163 |
| exon | 111997 | 112063 |
| exon | 112250 | 112342 |
| exon | 112942 | 113123 |
| CDS | 107325 | 107376 |
| CDS | 107745 | 107817 |
| CDS | 108002 | 108131 |
| CDS | 108216 | 108343 |
| CDS | 108710 | 108812 |
| CDS | 110697 | 111163 |
| CDS | 111997 | 112063 |
| CDS | 112250 | 112342 |
| CDS | 112942 | 113049 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000046 | |
| coexpression network | CFinderM000313 | transferase activity, transferring alkyl or aryl (other than methyl) groups, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.