PH01000374G1100's details annotation
1.Annotation
ICBR annotation: inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
Blast result AT5G18860 : 8.00E-108
Blast annotation: inosine-uridine preferring nucleoside hydrolase family protein
2.Location
Scaffold: PH01000374
Strand: +
| Region | Start | End |
| gene | 711604 | 715531 |
| mRNA | 711604 | 715531 |
| exon | 711604 | 712007 |
| exon | 712586 | 712765 |
| exon | 712878 | 713267 |
| exon | 713434 | 713574 |
| exon | 713717 | 713914 |
| exon | 714060 | 714295 |
| exon | 714380 | 714557 |
| exon | 714647 | 715027 |
| exon | 715133 | 715291 |
| exon | 715347 | 715531 |
| CDS | 711939 | 712007 |
| CDS | 712586 | 712765 |
| CDS | 712878 | 713267 |
| CDS | 713434 | 713574 |
| CDS | 713717 | 713914 |
| CDS | 714060 | 714295 |
| CDS | 714380 | 714557 |
| CDS | 714647 | 715027 |
| CDS | 715133 | 715291 |
| CDS | 715347 | 715445 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01156.18 | IU_nuc_hydro | 3 | 246 |
| PF01156.18 | IU_nuc_hydro | 296 | 640 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.