PH01000376G0190's details annotation
1.Annotation
ICBR annotation: receptor protein kinase CLAVATA1 precursor, putative, expressed
Blast result AT5G65700 : 0.00E+00
Blast annotation: Leucine-rich receptor-like protein kinase family protein
2.Location
Scaffold: PH01000376
Strand: +
| Region | Start | End |
| gene | 159328 | 164340 |
| mRNA | 159328 | 164340 |
| exon | 159328 | 162150 |
| exon | 162752 | 164340 |
| CDS | 159567 | 162150 |
| CDS | 162752 | 163233 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08263.11 | LRRNT_2 | 22 | 61 |
| PF12799.6 | LRR_4 | 137 | 176 |
| PF13855.5 | LRR_8 | 258 | 317 |
| PF00560.32 | LRR_1 | 524 | 544 |
| PF07714.16 | Pkinase_Tyr | 690 | 960 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.