PH01000376G0610's details annotation
1.Annotation
ICBR annotation: glucose-6-phosphate isomerase, putative, expressed
Blast result AT5G42740 : 0.00E+00
Blast annotation: Sugar isomerase (SIS) family protein
2.Location
Scaffold: PH01000376
Strand: +
| Region | Start | End |
| gene | 396260 | 406151 |
| mRNA | 396260 | 406151 |
| exon | 396260 | 396619 |
| exon | 397085 | 397132 |
| exon | 397430 | 397621 |
| exon | 397666 | 397762 |
| exon | 397861 | 397903 |
| exon | 398729 | 398796 |
| exon | 398906 | 398990 |
| exon | 399074 | 399122 |
| exon | 399341 | 399413 |
| exon | 399500 | 399560 |
| exon | 402929 | 402995 |
| exon | 403074 | 403130 |
| exon | 403231 | 403284 |
| exon | 403376 | 403504 |
| exon | 404105 | 404168 |
| exon | 404278 | 404351 |
| exon | 404433 | 404486 |
| exon | 404594 | 404662 |
| exon | 404895 | 404977 |
| exon | 405172 | 405241 |
| exon | 405420 | 405509 |
| exon | 405684 | 405791 |
| exon | 405929 | 406151 |
| CDS | 396569 | 396619 |
| CDS | 397085 | 397132 |
| CDS | 397430 | 397621 |
| CDS | 397666 | 397762 |
| CDS | 397861 | 397903 |
| CDS | 398729 | 398796 |
| CDS | 398906 | 398990 |
| CDS | 399074 | 399122 |
| CDS | 399341 | 399413 |
| CDS | 399500 | 399560 |
| CDS | 402929 | 402995 |
| CDS | 403074 | 403130 |
| CDS | 403231 | 403284 |
| CDS | 403376 | 403504 |
| CDS | 404105 | 404168 |
| CDS | 404278 | 404351 |
| CDS | 404433 | 404486 |
| CDS | 404594 | 404662 |
| CDS | 404895 | 404977 |
| CDS | 405172 | 405241 |
| CDS | 405420 | 405509 |
| CDS | 405684 | 405791 |
| CDS | 405929 | 405976 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00342.18 | PGI | 16 | 445 |
| PF00342.18 | PGI | 496 | 557 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | glucose-6-phosphate isomerase [EC:5.3.1.9] | ko00010 | K01810 |
| Pentose phosphate pathway | glucose-6-phosphate isomerase [EC:5.3.1.9] | ko00030 | K01810 |
| Starch and sucrose metabolism | glucose-6-phosphate isomerase [EC:5.3.1.9] | ko00500 | K01810 |
| Amino sugar and nucleotide sugar metabolism | glucose-6-phosphate isomerase [EC:5.3.1.9] | ko00520 | K01810 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004347 | glucose-6-phosphate isomerase activity |
| GO:0006094 | gluconeogenesis |
| GO:0006096 | glycolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.