Gene details

Annotation of co-expression genes

PH01000378G0940's details annotation

1.Annotation

ICBR annotation: alpha-amylase precursor, putative, expressed

Blast result AT1G76130 : 1.00E-147
Blast annotation: alpha-amylase-like 2

2.Location

Scaffold: PH01000378
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001153	translation, Ribosome structural constituent of ribosome, alpha-amylase activity, intracellular, large ribosomal subunit, rRNA binding, cation binding,
coexpression network	CFinderM001533	RLK-Pelle_LRR-Xa (from iTAK) cytochrome b6f complex, Ubiquinone_and_other_terpenoid-quinone_biosynthesis translation, cation binding, structural constituent of ribosome, alpha-amylase activity, large ribosomal subunit,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004556	alpha-amylase activity
GO:0005509	calcium ion binding
GO:0005975	carbohydrate metabolic process
GO:0043169	cation binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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