PH01000383G0300's details annotation
1.Annotation
ICBR annotation: MYB family transcription factor, putative, expressed
Blast result AT1G01060 : 3.30E-38
Blast annotation: Homeodomain-like superfamily protein
2.Location
Scaffold: PH01000383
Strand: -
| Region | Start | End |
| gene | 249376 | 256983 |
| mRNA | 249376 | 256983 |
| exon | 249376 | 250021 |
| exon | 250465 | 250686 |
| exon | 250753 | 250810 |
| exon | 252675 | 252977 |
| exon | 253064 | 254440 |
| exon | 254548 | 254777 |
| exon | 255407 | 255590 |
| exon | 255638 | 255745 |
| exon | 255913 | 255938 |
| exon | 256259 | 256983 |
| CDS | 249801 | 250021 |
| CDS | 250465 | 250686 |
| CDS | 250753 | 250810 |
| CDS | 252675 | 252977 |
| CDS | 253064 | 254440 |
| CDS | 254548 | 254777 |
| CDS | 255407 | 255590 |
| CDS | 255638 | 255745 |
| CDS | 255913 | 255938 |
| CDS | 256259 | 256301 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.