PH01000383G0390's details annotation
1.Annotation
ICBR annotation: O-methyltransferase, putative, expressed
Blast result AT5G54160 : 3.00E-124
Blast annotation: O-methyltransferase 1
2.Location
Scaffold: PH01000383
Strand: +
| Region | Start | End |
| gene | 320235 | 323531 |
| mRNA | 320235 | 323531 |
| exon | 320235 | 320806 |
| exon | 322321 | 323531 |
| CDS | 320613 | 320806 |
| CDS | 322321 | 322993 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08100.10 | Dimerisation | 31 | 70 |
| PF00891.17 | Methyltransf_2 | 114 | 331 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Flavone and flavonol biosynthesis | flavonol 3-O-methyltransferase [EC:2.1.1.76] | ko00944 | K05279 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
| GO:0008171 | O-methyltransferase activity |
| GO:0046983 | protein dimerization activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.