PH01000385G0650's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G14180 : 2.30E-94
Blast annotation: putative recombination initiation defect 1
2.Location
Scaffold: PH01000385
Strand: -
| Region | Start | End |
| gene | 505074 | 512794 |
| mRNA | 505074 | 512794 |
| exon | 505074 | 506196 |
| exon | 506842 | 507511 |
| exon | 507581 | 507861 |
| exon | 508622 | 509009 |
| exon | 509096 | 510065 |
| exon | 510163 | 510471 |
| exon | 511185 | 511369 |
| exon | 512338 | 512794 |
| CDS | 505978 | 506196 |
| CDS | 506842 | 507511 |
| CDS | 507581 | 507861 |
| CDS | 508622 | 509009 |
| CDS | 509096 | 510065 |
| CDS | 510163 | 510471 |
| CDS | 511185 | 511369 |
| CDS | 512338 | 512702 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.