PH01000388G0640's details annotation
1.Annotation
ICBR annotation: glyoxalase family protein, putative, expressed
Blast result AT1G08110 : 2.50E-87
Blast annotation: lactoylglutathione lyase family protein / glyoxalase I family protein
2.Location
Scaffold: PH01000388
Strand: +
| Region | Start | End |
| gene | 533554 | 539828 |
| mRNA | 533554 | 539828 |
| exon | 533554 | 534132 |
| exon | 534907 | 534968 |
| exon | 536939 | 536999 |
| exon | 537102 | 537181 |
| exon | 537294 | 537364 |
| exon | 537502 | 537591 |
| exon | 538746 | 539828 |
| CDS | 533758 | 534132 |
| CDS | 534907 | 534968 |
| CDS | 536939 | 536999 |
| CDS | 537102 | 537181 |
| CDS | 537294 | 537364 |
| CDS | 537502 | 537591 |
| CDS | 538746 | 538846 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00903.24 | Glyoxalase | 124 | 265 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Pyruvate metabolism | lactoylglutathione lyase [EC:4.4.1.5] | ko00620 | K01759 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004462 | lactoylglutathione lyase activity |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.