Gene details

Annotation of co-expression genes

PH01000391G0480's details annotation

1.Annotation

ICBR annotation: DEAD-box ATP-dependent RNA helicase, putative, expressed

Blast result AT5G11170 : 0.00E+00
Blast annotation: DEAD/DEAH box RNA helicase family protein

2.Location

Scaffold: PH01000391
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Spliceosome	ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]	ko03041	K12812
RNA transport	ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]	ko03013	K12812
mRNA surveillance pathway	ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]	ko03015	K12812

10.Gene Ontology

GO Accession	GO Annotation
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding
GO:0008026	ATP-dependent helicase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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