Gene details

Annotation of co-expression genes

PH01000394G0500's details annotation

1.Annotation

ICBR annotation: formamidopyrimidine-DNA glycosylase, putative, expressed

Blast result AT1G52500 : 8.00E-111
Blast annotation: MUTM homolog-1

2.Location

Scaffold: PH01000394
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Base excision repair	formamidopyrimidine-DNA glycosylase [EC:3.2.2.23;EC:4.2.99.18]	ko03410	K10563

10.Gene Ontology

GO Accession	GO Annotation
GO:0003676	nucleic acid binding
GO:0003684	damaged DNA binding
GO:0003906	DNA-(apurinic or apyrimidinic site) lyase activity
GO:0006284	base-excision repair
GO:0006289	nucleotide-excision repair
GO:0008270	zinc ion binding
GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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