PH01000404G0150's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, expressed
Blast result AT1G18370 : 0.00E+00
Blast annotation: ATP binding microtubule motor family protein
2.Location
Scaffold: PH01000404
Strand: +
| Region | Start | End |
| gene | 102525 | 107513 |
| mRNA | 102525 | 107513 |
| exon | 102525 | 103225 |
| exon | 103540 | 103670 |
| exon | 104319 | 104517 |
| exon | 104612 | 104935 |
| exon | 105018 | 105917 |
| exon | 106023 | 106348 |
| exon | 106662 | 107513 |
| CDS | 102881 | 103225 |
| CDS | 103540 | 103670 |
| CDS | 104319 | 104517 |
| CDS | 104612 | 104935 |
| CDS | 105018 | 105917 |
| CDS | 106023 | 106348 |
| CDS | 106662 | 107004 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00225.22 | Kinesin | 160 | 217 |
| PF11995.7 | DUF3490 | 669 | 830 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.