PH01000412G0690's details annotation
1.Annotation
ICBR annotation: protein kinase family protein, putative, expressed
Blast result AT5G59010 : 1.80E-55
Blast annotation: Protein kinase protein with tetratricopeptide repeat domain
2.Location
Scaffold: PH01000412
Strand: +
| Region | Start | End |
| gene | 412399 | 418519 |
| mRNA | 412399 | 418519 |
| exon | 412399 | 413176 |
| exon | 413271 | 413376 |
| exon | 413897 | 413982 |
| exon | 414084 | 414242 |
| exon | 414990 | 415091 |
| exon | 415519 | 415584 |
| exon | 417080 | 417088 |
| exon | 417828 | 418519 |
| CDS | 413069 | 413176 |
| CDS | 413271 | 413376 |
| CDS | 413897 | 413982 |
| CDS | 414084 | 414242 |
| CDS | 414990 | 415091 |
| CDS | 415519 | 415584 |
| CDS | 417080 | 417088 |
| CDS | 417828 | 417848 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07714.16 | Pkinase_Tyr | 3 | 101 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.