PH01000414G0490's details annotation
1.Annotation
ICBR annotation: FZL, putative, expressed
Blast result AT1G03160 : 0.00E+00
Blast annotation: FZO-like
2.Location
Scaffold: PH01000414
Strand: -
| Region | Start | End |
| gene | 336408 | 349741 |
| mRNA | 336408 | 349741 |
| exon | 336408 | 336513 |
| exon | 336670 | 336903 |
| exon | 337259 | 337489 |
| exon | 339044 | 339211 |
| exon | 339904 | 340347 |
| exon | 340453 | 340539 |
| exon | 343970 | 344101 |
| exon | 344674 | 344871 |
| exon | 345824 | 345892 |
| exon | 346024 | 346589 |
| exon | 347285 | 349741 |
| CDS | 336505 | 336513 |
| CDS | 336670 | 336903 |
| CDS | 337259 | 337489 |
| CDS | 339044 | 339211 |
| CDS | 339904 | 340347 |
| CDS | 340453 | 340539 |
| CDS | 343970 | 344101 |
| CDS | 344674 | 344871 |
| CDS | 345824 | 345892 |
| CDS | 346024 | 346589 |
| CDS | 347285 | 347753 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01926.22 | MMR_HSR1 | 366 | 498 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0005525 | GTP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.