PH01000414G0520's details annotation
1.Annotation
ICBR annotation: phospholipase, putative, expressed
Blast result AT1G06800 : 3.00E-129
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01000414
Strand: +
| Region | Start | End |
| gene | 375565 | 380417 |
| mRNA | 375565 | 380417 |
| exon | 375565 | 377794 |
| exon | 377876 | 378198 |
| exon | 379101 | 379308 |
| exon | 379558 | 380417 |
| CDS | 376760 | 377794 |
| CDS | 377876 | 378198 |
| CDS | 379101 | 379308 |
| CDS | 379558 | 380313 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01764.24 | Lipase_3 | 233 | 392 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004806 | triglyceride lipase activity |
| GO:0006629 | lipid metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.