PH01000418G0710's details annotation
1.Annotation
ICBR annotation: non-lysosomal glucosylceramidase, putative, expressed
Blast result AT5G49900 : 0.00E+00
Blast annotation: Beta-glucosidase, GBA2 type family protein
2.Location
Scaffold: PH01000418
Strand: -
| Region | Start | End |
| gene | 488932 | 492163 |
| mRNA | 488932 | 492163 |
| exon | 488932 | 489331 |
| exon | 489759 | 490049 |
| exon | 490801 | 491725 |
| exon | 491804 | 491865 |
| exon | 492084 | 492163 |
| CDS | 489058 | 489331 |
| CDS | 489759 | 490049 |
| CDS | 490801 | 491725 |
| CDS | 491804 | 491865 |
| CDS | 492084 | 492118 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Glycoside_Hydrolases | GH116 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04685.12 | DUF608 | 107 | 467 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.