PH01000422G0810's details annotation
1.Annotation
ICBR annotation: phospholipase D, putative, expressed
Blast result AT2G42010 : 5.60E-47
Blast annotation: phospholipase D beta 1
2.Location
Scaffold: PH01000422
Strand: -
| Region | Start | End |
| gene | 683917 | 688729 |
| mRNA | 683917 | 688729 |
| exon | 683917 | 684112 |
| exon | 684226 | 684341 |
| exon | 686311 | 686458 |
| exon | 686745 | 686800 |
| exon | 686951 | 687005 |
| exon | 687149 | 688729 |
| CDS | 684083 | 684112 |
| CDS | 684226 | 684341 |
| CDS | 686311 | 686458 |
| CDS | 686745 | 686800 |
| CDS | 686951 | 687005 |
| CDS | 687149 | 687439 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00614.21 | PLDc | 37 | 71 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.