PH01000428G0040's details annotation 1.Annotation ICBR annotation: MYB family transcription factor, putative, expressed
Blast result AT3G52250 : 1.00E-84 Blast annotation: Duplicated homeodomain-like superfamily protein 2.Location Scaffold: PH01000428 Strand: + Region | Start | End | gene | 13428 | 18509 | mRNA | 13428 | 18509 | exon | 13428 | 14716 | exon | 15615 | 18509 | CDS | 13612 | 14716 | CDS | 15615 | 18433 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM001083 | MYB-related Transcription_Regulator(from iTAK) MYB_related Transcription_Regulator(from PlantTFDB) Pseudo ARR-B Transcription_Regulator(from iTAK) protein import into mitochondrial inner membrane, transcription, DNA-dependent, nucleus, IWS1 Transcription_Regulator(from iTAK) GNAT Transcription_Regulator(from iTAK)
| coexpression network | CFinderM001834 | phosphopyruvate hydratase complex, TAZ Transcription_Regulator(from iTAK) L-malate dehydrogenase activity, transcription cofactor activity, malate dehydrogenase activity, phosphopyruvate hydratase activity, histone acetyltransferase activity, malate metabolic process, cellular carbohydrate metabolic process, MYB-related Transcription_Regulator(from iTAK) MYB_related Transcription_Regulator(from PlantTFDB)
| coexpression network | CFinderM001835 | MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK) nuclear chromosome, chromatin binding,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | MYB-related | Transcription_Regulator(from PlantTFDB) | MYB_related |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00249.30 | Myb_DNA-binding | 438 | 481 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003677 | DNA binding | GO:0003682 | chromatin binding |
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