PH01000428G0940's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, putative, expressed
Blast result AT3G45850 : 0.00E+00
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000428
Strand: +
| Region | Start | End |
| gene | 635325 | 644606 |
| mRNA | 635325 | 644606 |
| exon | 635325 | 637637 |
| exon | 637748 | 637877 |
| exon | 638035 | 638196 |
| exon | 638285 | 638764 |
| exon | 638869 | 638966 |
| exon | 639057 | 639213 |
| exon | 639323 | 639392 |
| exon | 639753 | 639829 |
| exon | 639942 | 639995 |
| exon | 640073 | 640153 |
| exon | 640241 | 640352 |
| exon | 640554 | 640640 |
| exon | 641440 | 641526 |
| exon | 641624 | 641799 |
| exon | 641894 | 642055 |
| exon | 642132 | 642239 |
| exon | 642324 | 642482 |
| exon | 642574 | 642657 |
| exon | 642825 | 643030 |
| exon | 643114 | 643215 |
| exon | 643313 | 643422 |
| exon | 643512 | 643663 |
| exon | 643756 | 644606 |
| CDS | 637474 | 637637 |
| CDS | 637748 | 637877 |
| CDS | 638035 | 638196 |
| CDS | 638285 | 638764 |
| CDS | 638869 | 638966 |
| CDS | 639057 | 639213 |
| CDS | 639323 | 639392 |
| CDS | 639753 | 639829 |
| CDS | 639942 | 639995 |
| CDS | 640073 | 640153 |
| CDS | 640241 | 640352 |
| CDS | 640554 | 640640 |
| CDS | 641440 | 641526 |
| CDS | 641624 | 641799 |
| CDS | 641894 | 642055 |
| CDS | 642132 | 642239 |
| CDS | 642324 | 642482 |
| CDS | 642574 | 642657 |
| CDS | 642825 | 643030 |
| CDS | 643114 | 643215 |
| CDS | 643313 | 643422 |
| CDS | 643512 | 643663 |
| CDS | 643756 | 643995 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00225.22 | Kinesin | 53 | 392 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.