PH01000430G0600's details annotation
1.Annotation
ICBR annotation: histidine triad family protein, putative, expressed
Blast result AT3G56490 : 2.70E-61
Blast annotation: HIS triad family protein 3
2.Location
Scaffold: PH01000430
Strand: +
| Region | Start | End |
| gene | 354738 | 362202 |
| mRNA | 354738 | 362202 |
| exon | 354738 | 358391 |
| exon | 360141 | 360198 |
| exon | 361011 | 361100 |
| exon | 361247 | 361364 |
| exon | 361449 | 362202 |
| CDS | 358336 | 358391 |
| CDS | 360141 | 360198 |
| CDS | 361011 | 361100 |
| CDS | 361247 | 361364 |
| CDS | 361449 | 361516 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01230.22 | HIT | 26 | 123 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.