PH01000432G0670's details annotation
1.Annotation
ICBR annotation: oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
Blast result AT1G67730 : 6.00E-100
Blast annotation: beta-ketoacyl reductase 1
2.Location
Scaffold: PH01000432
Strand: +
| Region | Start | End |
| gene | 470329 | 473237 |
| mRNA | 470329 | 473237 |
| exon | 470329 | 471233 |
| exon | 471820 | 471889 |
| exon | 472669 | 473237 |
| CDS | 470599 | 471233 |
| CDS | 471820 | 471889 |
| CDS | 472669 | 472926 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00106.24 | adh_short | 53 | 246 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Fatty acid elongation | 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.-] | ko00062 | K10251 |
| Steroid hormone biosynthesis | 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.-] | ko00140 | K10251 |
| Biosynthesis of unsaturated fatty acids | 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.-] | ko01040 | K10251 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016491 | oxidoreductase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.