PH01000435G0650's details annotation
1.Annotation
ICBR annotation: caffeoyl-CoA O-methyltransferase, putative, expressed
Blast result AT4G34050 : 7.70E-62
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01000435
Strand: -
| Region | Start | End |
| gene | 379311 | 380818 |
| mRNA | 379311 | 380818 |
| exon | 379311 | 379680 |
| exon | 379802 | 380078 |
| exon | 380174 | 380253 |
| exon | 380365 | 380818 |
| CDS | 379387 | 379680 |
| CDS | 379802 | 380078 |
| CDS | 380174 | 380253 |
| CDS | 380365 | 380457 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01596.16 | Methyltransf_3 | 36 | 228 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008171 | O-methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.