PH01000436G0020's details annotation
1.Annotation
ICBR annotation: NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed
Blast result AT5G08530 : 0.00E+00
Blast annotation: 51 kDa subunit of complex I
2.Location
Scaffold: PH01000436
Strand: -
| Region | Start | End |
| gene | 9724 | 13240 |
| mRNA | 9724 | 13240 |
| exon | 9724 | 10299 |
| exon | 10394 | 10930 |
| exon | 10971 | 11351 |
| exon | 12193 | 13240 |
| CDS | 9772 | 10299 |
| CDS | 10394 | 10930 |
| CDS | 10971 | 11351 |
| CDS | 12193 | 12582 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01512.16 | Complex1_51K | 233 | 404 |
| PF10589.8 | NADH_4Fe-4S | 513 | 595 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
| GO:0010181 | FMN binding |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H |
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.