PH01000439G0350's details annotation
1.Annotation
ICBR annotation: magnesium-protoporphyrin O-methyltransferase, putative, expressed
Blast result AT4G25080 : 1.90E-87
Blast annotation: magnesium-protoporphyrin IX methyltransferase
2.Location
Scaffold: PH01000439
Strand: +
| Region | Start | End |
| gene | 223316 | 224921 |
| mRNA | 223316 | 224921 |
| exon | 223316 | 224921 |
| CDS | 224221 | 224652 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07109.10 | Mg-por_mtran_C | 225 | 320 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Porphyrin and chlorophyll metabolism | magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11 ] | ko00860 | K03428 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015995 | chlorophyll biosynthetic process |
| GO:0046406 | magnesium protoporphyrin IX methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.